Raymond F. Baker Center for Plant Breeding

Dr. William Beavis

Publications

Publications 2003-2008

 

Brock, GN, WD Beavis,LS Kubatko (2008) Fuzzy logic and related methods as a screening tool for detecting gene regulatory networks. Informat.Fusion doi:10.1016/j.inffus.2008.11.008.

Mudge,J, NA Miller, I Khrebtukova, IE Lindquist, GD May, JJ Huntley, S Lu, L Zhang, JC van Velkinburgh, AD Farmer, S Lewis, WD Beavis, FD Schilkey, SM Virk, CF Black, MK Myers, LC Mader, RJ Langley, JP Utsey, RW Kim, RC Roberts, SK Khalsa, M Garcia, V Ambriz-Griffith, R Harlan, WCzika, S Martin, RD Wolfinger, NI Perrone-Bizzozero, GP Schroth, SF Kingsmore. (2008) Genomic Convergence Analysis of Schizophrenia. 1. mRNA Sequencing Reveals Altered Synaptic Vesicular Transport in Post-Mortem Cerebellum. PLoS ONE (accepted 10-2-08).

Kingsmore, SF, IE Lindquist, J Mudge, DD Gesler, WD Beavis (2008) Genome-wide association studies: progress and potential for drug discovery and development. Nature Reviews (adv online publication) doi:10.1038/nrd2519.

Huntley, JA, SJ Maleki, MD Gonzales, WD Beavis (2008) Bioinformatic tools, resources and strategies for comparative structural studies for food allergens. In Eds. Siantar, DP, MW Trucksess, PM Scott, WM Herman. Food Contaminants: Mycotoxins and Food Allergens. American Chemical Society, Washington DC pp 322-356.

Gonzales, MD K Gajendran, A D. Farmer, E Archuleta, W D. Beavis (2007). Leveraging model legume information to find candidate genes for soybean Sudden Death Syndrome using the Legume Information System (LIS) In Ed. Edwards D. Methods in Molecular Biology, Humana Press (USA), pp. 245-260.

Munneke, B, WD Beavis, KA Schlauch, and RW Doerge (2005). Adding Confidence to Gene Expression clustering. Genetics170:2003-2011.

Beavis, WD. (2005) Architectures for Integration of Data and Applications: Lessons from Integration Projects. In The Stadler Genetics Symposium XXII. Columbia, Missouri.

Gonzales, M, E Archuleta, A Farmer, K Gajendran, D Grant, R Shoemaker, WD Beavis, ME Waugh (2005). THE LEGUME INFORMATION System (LIS): An Integrated Information Resource for Comparative Legume Biology. Nucleic Acids Research 33: D660-D665

Thro, AM, W Parrott, JA. Udall, WD Beavis. (2004). Genomics and Plant Breeding: The Experience of the Initiative for Future Agricultural and Food Systems. Crop Science 44:1836

Churchill, GA et al (2004). The Collaborative Cross: A Community Resource for the Genetic Analysis of Complex Traits. Nature Genetics 36:1133-7

Tuggle, CK, JA Green, C Fitzsimmons, R Woods, RS Prather, S Malchenko, M Bento-Soares, T Kucaba, K Crouch, C Smith, D Tack, N Robinson, B O’Leary, T Scheetz, T Casavant, D Pomp, JB Edeal, Y Zhang, MF Rothschild, K Garwood, WD Beavis. (2003) EST-Based Discovery in Pig: Virtual Expression Patterns and Comparative Mapping to Human. Mammalian Genome 14: 565-579.

Jansen, RC, JL Jannink and WD Beavis. (2003) Mapping quantitative trait loci in plant breeding populations: use of parental haplotype sharing. Crop Science 43: 829-834.

 

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